Package: copcor 2024.7-31
copcor: Correlates of Protection and Correlates of Risk Functions
Correlates of protection (CoP) and correlates of risk (CoR) study the immune biomarkers associated with an infectious disease outcome, e.g. COVID or HIV-1 infection. This package contains shared functions for analyzing CoP and CoR, including bootstrapping procedures, competing risk estimation, and bootstrapping marginalized risks.
Authors:
copcor_2024.7-31.tar.gz
copcor_2024.7-31.zip(r-4.5)copcor_2024.7-31.zip(r-4.4)copcor_2024.7-31.zip(r-4.3)
copcor_2024.7-31.tgz(r-4.4-any)copcor_2024.7-31.tgz(r-4.3-any)
copcor_2024.7-31.tar.gz(r-4.5-noble)copcor_2024.7-31.tar.gz(r-4.4-noble)
copcor_2024.7-31.tgz(r-4.4-emscripten)copcor_2024.7-31.tgz(r-4.3-emscripten)
copcor.pdf |copcor.html✨
copcor/json (API)
| # Install 'copcor' in R: |
| install.packages('copcor', repos = c('https://youyifong.r-universe.dev', 'https://cloud.r-project.org')) |
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:79ffb81f9a. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 31 2024 |
| R-4.5-win | OK | Aug 31 2024 |
| R-4.5-linux | OK | Aug 31 2024 |
| R-4.4-win | OK | Aug 31 2024 |
| R-4.4-mac | OK | Aug 31 2024 |
| R-4.3-win | OK | Aug 31 2024 |
| R-4.3-mac | OK | Aug 31 2024 |
Exports:cove.boost.collapse.stratadraw.x.axis.corget.xlimmarker.name.to.assaypcrpcr2predictCompetingRiskpredictCompetingRisk2
Dependencies:kyotil
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| copcor | copcor |
| Collapse sample strata for COVE boost correlates study | cove.boost.collapse.strata |
| Plotting Helper Functions | draw.x.axis.cor get.xlim |
| Cumulative Incidence Function (CIF) Under Competing Risk | pcr pcr2 predictCompetingRisk predictCompetingRisk2 |
| Utility Functions | marker.name.to.assay |
